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1

Dietary Fructose and Microbiota-Derived Short-Chain Fatty Acids Promote Bacteriophage Production in the Gut Symbiont Lactobacillus reuteri

Oh, Jee-Hwan, Alexander, Laura M., Pan, Meichen, Schueler, Kathryn L., Keller, Mark P., Attie, Alan D., Walter, Jens, van Pijkeren, Jan-Peter

Journal:

Cell Host & Microbe

Year:

2019

Language:

english

File:

PDF, 2.30 MB

english, 2019

2

Identification of probiotic effector molecules: present state and future perspectives

Lebeer, Sarah, Bron, Peter A, Marco, Maria L, Van Pijkeren, Jan-Peter, O’Connell Motherway, Mary, Hill, Colin, Pot, Bruno, Roos, Stefan, Klaenhammer, Todd

Journal:

Current Opinion in Biotechnology

Year:

2018

Language:

english

File:

PDF, 532 KB

english, 2018

3

CRISPR-Cas9-assisted recombineering in Lactobacillus reuteri

Oh, J.-H., van Pijkeren, J.-P.

Journal:

Nucleic Acids Research

Year:

2014

Language:

english

File:

PDF, 2.28 MB

english, 2014

4

Precision genome engineering in lactic acid bacteria

van Pijkeren, Jan Peter, Britton, Robert A

Journal:

Microbial Cell Factories

Year:

2014

Language:

english

File:

PDF, 1.01 MB

english, 2014

5

High efficiency recombineering in lactic acid bacteria

van Pijkeren, J.-P., Britton, R. A.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 4.75 MB

english, 2012

6

Supplementation of Saturated Long-Chain Fatty Acids Maintains Intestinal Eubiosis and Reduces Ethanol-induced Liver Injury in Mice

Chen, Peng, Torralba, Manolito, Tan, Justin, Embree, Mallory, Zengler, Karsten, Stärkel, Peter, van Pijkeren, Jan-Peter, DePew, Jessica, Loomba, Rohit, Ho, Samuel B., Bajaj, Jasmohan S., Mutlu, Ece A.

Journal:

Gastroenterology

Year:

2015

Language:

english

File:

PDF, 5.29 MB

english, 2015

7

Secretion of Recombinant Interleukin-22 by Engineered Lactobacillus reuteri Reduces Fatty Liver Disease in a Mouse Model of Diet-Induced Obesity

Oh, Jee-Hwan, Schueler, Kathryn L., Stapleton, Donnie S., Alexander, Laura M., Yen, Chi-Liang Eric, Keller, Mark P., Attie, Alan D., van Pijkeren, Jan-Peter, Marco, Maria L.

Journal:

Year:

2020

File:

PDF, 996 KB

2020

8

Distribution of Megaplasmids in Lactobacillus salivarius and Other Lactobacilli

Li, Y., Canchaya, C., Fang, F., Raftis, E., Ryan, K. A., van Pijkeren, J.-P., van Sinderen, D., O'Toole, P. W.

Journal:

Journal of Bacteriology

Year:

2007

Language:

english

File:

PDF, 396 KB

english, 2007

9

Bacteria engineered to produce IL-22 in intestine induce expression of REG3G to reduce ethanol-induced liver disease in mice

Hendrikx, Tim, Duan, Yi, Wang, Yanhan, Oh, Jee-Hwan, Alexander, Laura M, Huang, Wendy, Stärkel, Peter, Ho, Samuel B, Gao, Bei, Fiehn, Oliver, Emond, Patrick, Sokol, Harry, van Pijkeren, Jan-Peter, Sch

Journal:

Year:

2018

Language:

english

File:

PDF, 6.15 MB

english, 2018

10

Fibrinogen-binding and platelet-aggregation activities of a Lactobacillus salivarius septicaemia isolate are mediated by a novel fibrinogen-binding protein

James Collins, Jan-Peter van Pijkeren, Lisbeth Svensson, Marcus J. Claesson, Mark Sturme, Yin Li, Jakki C. Cooney, Douwe van Sinderen, Alan W. Walker, Julian Parkhill, Oonagh Shannon, Paul W. O'Toole

Journal:

Molecular Microbiology

Year:

2012

Language:

english

File:

PDF, 629 KB

english, 2012

11

Simultaneous excitation of both collision partners in He-He collisions

Vlieger, G J N E de, Eck, J van, Pijkeren, D van, Heideman, H G M

Journal:

Journal of Physics B Atomic and Molecular Physics

Year:

1981

Language:

english

File:

PDF, 217 KB

english, 1981

12

Characterization of genes involved in galactooligosaccharide metabolism in Lactobacillus reuteri and their ecological role in the gastrointestinal tract

Rattanaprasert, Monchaya, van Pijkeren, Jan-Peter, Ramer-Tait, Amanda E., Quintero, Maria, Kok, Car Reen, Walter, Jens, Hutkins, Robert W.

Journal:

Applied and Environmental Microbiology

Year:

2019

Language:

english

File:

PDF, 2.99 MB

english, 2019

13

CRISPR-Cas9 mediated genome editing in vancomycin-resistant Enterococcus faecium

de Maat, Vincent, Stege, Paul B, Dedden, Mark, Hamer, Maud, van Pijkeren, Jan-Peter, Willems, Rob J L, van Schaik, Willem

Journal:

FEMS Microbiology Letters

Year:

2020

File:

PDF, 1.22 MB

2020

14

A Novel Listeria monocytogenes -Based DNA Delivery System for Cancer Gene Therapy

van Pijkeren, Jan Peter, Morrissey, David, Monk, Ian R., Cronin, Michelle, Rajendran, Simon, O'Sullivan, Gerald C., Gahan, Cormac G.M., Tangney, Mark

Journal:

Human Gene Therapy

Year:

2010

Language:

english

File:

PDF, 392 KB

english, 2010

15

Control and Augmentation of Long-Term Plasmid Transgene Expression In Vivo in Murine Muscle Tissue and Ex Vivo in Patient Mesenchymal Tissue

Morrissey, David, van Pijkeren, Jan P., Rajendran, Simon, Collins, Sara A., Casey, Garrett, O'Sullivan, Gerald C., Tangney, Mark

Journal:

Journal of Biomedicine and Biotechnology

Year:

2012

Language:

english

File:

PDF, 1.30 MB

english, 2012

16

Vibrational-state-selected ion—molecule reaction cross sections at thermal energies

D. Van Pijkeren, E. Boltjes, J. Van Eck, A. Niehaus

Journal:

Chemical Physics

Year:

1984

Language:

english

File:

PDF, 1.03 MB

english, 1984

17

The influence of internal energy on the cross section of the ion-molecule reaction C3H+4 (C3H4, H)C6H+7

D. Van Pijkeren, J. Van Eck, A. Niehaus

Journal:

Chemical Physics

Year:

1986

Language:

english

File:

PDF, 595 KB

english, 1986

18

De lactatiekundige, een jonge beroepsgroep binnen de zorgsector

G. van Pijkeren

Journal:

Year:

2012

Language:

dutch

File:

PDF, 79 KB

dutch, 2012

19

Comparative and Functional Analysis of Sortase-Dependent Proteins in the Predicted Secretome of Lactobacillus salivarius UCC118

van Pijkeren, J.-P., Canchaya, C., Ryan, K. A., Li, Y., Claesson, M. J., Sheil, B., Steidler, L., O'Mahony, L., Fitzgerald, G. F., van Sinderen, D., O'Toole, P. W.

Journal:

Applied and Environmental Microbiology

Year:

2006

Language:

english

File:

PDF, 185 KB

english, 2006

20

Prophages in Lactobacillus reuteri Are Associated with Fitness Trade-Offs but Can Increase Competitiveness in the Gut Ecosystem

Oh, Jee-Hwan, Lin, Xiaoxi B., Zhang, Shenwei, Tollenaar, Stephanie L., Özçam, Mustafa, Dunphy, Case, Walter, Jens, van Pijkeren, Jan-Peter, Kivisaar, Maia

Journal:

Applied and Environmental Microbiology

Year:

2019

File:

PDF, 1.58 MB

2019

21

Genome Editing of Food-Grade Lactobacilli To Develop Therapeutic Probiotics

van Pijkeren, Jan-Peter, Barrangou, Rodolphe

Journal:

Microbiology Spectrum

Year:

2017

Language:

english

File:

PDF, 2.50 MB

english, 2017

22

The gut symbionts Lactobacillus reuteri R2lc and 2010 encode a polyketide synthase cluster that activates the mammalian aryl-hydrocarbon receptor

Özçam, Mustafa, Tocmo, Restituto, Oh, Jee-Hwan, Afrazi, Amin, Mezrich, Joshua D., Roos, Stefan, Claesen, Jan, van Pijkeren, Jan-Peter

Journal:

Applied and Environmental Microbiology

Year:

2018

Language:

english

File:

PDF, 2.10 MB

english, 2018

23

Second-generation Probiotics Producing IL-22 Increase Survival of Mice After Total Body Irradiation

ZHANG, XICHEN, FISHER, RENEE, HOU, WEN, SHIELDS, DONNA, EPPERLY, MICHAEL W., WANG, HONG, WEI, LIANG, LEIBOWITZ, BRIAN J., YU, JIAN, ALEXANDER, LAURA M., VAN PIJKEREN, JAN-PETER, WATKINS, SIMON, WIPF,

Journal:

Year:

2020

File:

PDF, 650 KB

2020

24

Histamine Derived from Probiotic Lactobacillus reuteri Suppresses TNF via Modulation of PKA and ERK Signaling

Thomas, Carissa M., Hong, Teresa, van Pijkeren, Jan Peter, Hemarajata, Peera, Trinh, Dan V., Hu, Weidong, Britton, Robert A., Kalkum, Markus, Versalovic, James, Heimesaat, Markus M.

Journal:

Year:

2012

Language:

english

File:

PDF, 1.27 MB

english, 2012

25

Mass spectrometric analysis of PTM dynamics using stable isotope labeled metabolic precursors in cell culture

van Pijkeren, Alienke, Bischoff, Rainer, Kwiatkowski, Marcel

Journal:

The Analyst (Royal Society of Chemistry)

Year:

2019

File:

PDF, 1.47 MB

2019

26

Exploring optimization parameters to increase ssDNA recombineering in Lactococcus lactis and Lactobacillus reuteri

van Pijkeren, Jan-Peter, Neoh, Kar Mun, Sirias, Denise, Findley, Anthony S., Britton, Robert A.

Journal:

Year:

2012

Language:

english

File:

PDF, 469 KB

english, 2012

27

Second-generation Probiotics Producing IL-22 Increase Survival of Mice After Total Body Irradiation

ZHANG, XICHEN, FISHER, RENEE, HOU, WEN, SHIELDS, DONNA, EPPERLY, MICHAEL W., WANG, HONG, WEI, LIANG, LEIBOWITZ, BRIAN J., YU, JIAN, ALEXANDER, LAURA M., VAN PIJKEREN, JAN-PETER, WATKINS, SIMON, WIPF,

Journal:

Year:

2020

Language:

english

File:

PDF, 650 KB

english, 2020

28

Characterization of Endogenous Plasmids from Lactobacillus salivarius UCC118

Fang, F., Flynn, S., Li, Y., Claesson, M. J., van Pijkeren, J.-P., Collins, J. K., van Sinderen, D., O'Toole, P. W.

Journal:

Applied and Environmental Microbiology

Year:

2008

Language:

english

File:

PDF, 1.22 MB

english, 2008

29

Mass spectrometric analysis of PTM dynamics using stable isotope labeled metabolic precursors in cell culture

van Pijkeren, Alienke, Bischoff, Rainer, Kwiatkowski, Marcel

Journal:

The Analyst (Royal Society of Chemistry)

Year:

2019

Language:

english

File:

PDF, 1.47 MB

english, 2019

30

A new method for the measurement of vibrational-state-selected ion-molecule reactions at thermal energies

D. Van Pijkeren, J. Van Eck, A. Niehaus

Journal:

Chemical Physics Letters

Year:

1983

Language:

english

File:

PDF, 310 KB

english, 1983

31

Anti-metastatic effects of viral and non-viral mediated Nk4 delivery to tumours

Alexandra Buhles, Sara A Collins, Jan P van Pijkeren, Simon Rajendran, Michelle Miles, Gerald C O'Sullivan, Deirdre M O'Hanlon, Mark Tangney

Journal:

Genetic Vaccines and Therapy

Year:

2009

Language:

english

File:

PDF, 612 KB

english, 2009

32

Plat op de buik gaan!

Esther van Pijkeren

Journal:

Critical Care (Bohn Stafleu Van Loghum BV.)

Year:

2014

Language:

dutch

File:

PDF, 400 KB

dutch, 2014

33

Vier jaar interventie ‘Armoede en Gezondheid van kinderen’ in Zwolle: een terugblik

K.J. Kuiperij,M. van den Bosch-van Pijkeren

Journal:

JGZ Tijdschrift voor jeugdgezondheidszorg

Year:

2014

Language:

dutch

File:

PDF, 230 KB

dutch, 2014

34

Multireplicon genome architecture of Lactobacillus salivarius

Claesson, M. J., Li, Y., Leahy, S., Canchaya, C., van Pijkeren, J. P., Cerdeno-Tarraga, A. M., Parkhill, J., Flynn, S., O'Sullivan, G. C., Collins, J. K., Higgins, D., Shanahan, F., Fitzgerald, G. F.,

Journal:

Proceedings of the National Academy of Sciences

Year:

2006

Language:

english

File:

PDF, 1.09 MB

english, 2006

35

Exploiting Prophage-mediated Lysis for Biotherapeutic Release by Lactobacillus reuteri

Alexander, Laura M., Oh, Jee-Hwan, Stapleton, Donald S., Schueler, Kathryn L., Keller, Mark P., Attie, Alan D., van Pijkeren, Jan-Peter

Journal:

Applied and Environmental Microbiology

Year:

2019

File:

PDF, 1.19 MB

2019

36

Draft Genome Sequences of 12 Lactobacillus reuteri Strains of Rodent Origin

Zhang, Shenwei, ÃzÃ§am, Mustafa, van Pijkeren, Jan-Peter, Rasko, David

Journal:

Microbiology Resource Announcements

Year:

2020

Language:

english

File:

PDF, 122 KB

english, 2020

37

Role of Lactobacillus reuteri cell and mucus-binding protein A (CmbA) in adhesion to intestinal epithelial cells and mucus in vitro

Jensen, H., Roos, S., Jonsson, H., Rud, I., Grimmer, S., van Pijkeren, J.-P., Britton, R. A., Axelsson, L.

Journal:

Microbiology (Society for General Microbiology)

Year:

2014

Language:

english

File:

PDF, 472 KB

english, 2014

38

Schistosoma mansoni: ability of Con A to protect in vitro mechanically transformed schistosomula against the lethal effect of immune serum plus complement

van Pijkeren, Thea A., Tavares, C. A. P., Gazzinelli, G.

Journal:

Year:

1982

Language:

english

File:

PDF, 846 KB

english, 1982

39

Genome alterations associated with improved transformation efficiency in Lactobacillus reuteri

Ortiz-Velez, Laura, Ortiz-Villalobos, Javiera, Schulman, Abby, Oh, Jee-Hwan, van Pijkeren, Jan-Peter, Britton, Robert A.

Journal:

Microbial Cell Factories

Year:

2018

Language:

english

File:

PDF, 1.60 MB

english, 2018

40

A Phylogenetic View on the Role of Glycerol for Growth Enhancement and Reuterin Formation in Limosilactobacillus reuteri

Zhang, Zhihong, Wang, Kaiming, Oh, Jee-Hwan, Zhang, Shenwei, van Pijkeren, Jan-Peter, Cheng, Christopher C., Ren, Dayong, Wei, Hua, GÃ¤nzle, Michael G., Walter, Jens

Journal:

Frontiers in Microbiology

Year:

2020

File:

PDF, 3.91 MB

2020

41

Lactobacillus salivarius modulates cytokine induction and virulence factor gene expression in Helicobacter pylori

Ryan, K. A., O'Hara, A. M., van Pijkeren, J.-P., Douillard, F. P., O'Toole, P. W.

Journal:

Journal of Medical Microbiology

Year:

2009

Language:

english

File:

PDF, 331 KB

english, 2009

42

D-Alanyl-D-Alanine Ligase as a Broad-Host-Range Counterselection Marker in Vancomycin-Resistant Lactic Acid Bacteria

Zhang, Shenwei, Oh, Jee-Hwan, Alexander, Laura M., Özçam, Mustafa, van Pijkeren, Jan-Peter, Becker, Anke

Journal:

Journal of Bacteriology

Year:

2018

Language:

english

File:

PDF, 3.24 MB

english, 2018

43

Editorial overview: Food biotechnology

Blenner, Mark, van Pijkeren, Jan-Peter

Journal:

Current Opinion in Biotechnology

Year:

2020

Language:

english

File:

PDF, 286 KB

english, 2020

44

Exploiting CRISPR–Cas immune systems for genome editing in bacteria

Barrangou, Rodolphe, van Pijkeren, Jan-Peter

Journal:

Current Opinion in Biotechnology

Year:

2016

Language:

english

File:

PDF, 994 KB

english, 2016

45

Ecological importance of cross-feeding of the intermediate metabolite 1,2-propanediol between bacterial gut symbionts

Cheng, Christopher C., Duar, Rebbeca M., Lin, Xiaoxi, Perez-Munoz, Maria Elisa, Tollenaar, Stephanie, Oh, Jee-Hwan, van Pijkeren, Jan-Peter, Li, Fuyong, van Sinderen, Douwe, GÃ¤nzle, Michael G., Walte

Journal:

Applied and Environmental Microbiology

Year:

2020

File:

PDF, 1.65 MB

2020

46

Specific Taxa of the Intestinal Microbiome Mitigate the Radiation-Induced Gastrointestinal Syndrome

Epperly, M., Yu, J., van Pijkeren, J.P., Methe, B., Li, K., Fisher, R., Lundy, J., Zhang, X., Shields, D., Hou, W., Leibowitz, B., Wipf, P., Alexander, L., Huq, M.S., Wang, H., Greenberger, J.S.

Journal:

International Journal of Radiation Oncology*Biology*Physics

Year:

2020

File:

PDF, 254 KB

2020

47

Internal-energy-selected measurements on the relative cross section of the ion-molecule reaction NH3+(NH3, NH2)NH4+

D. van Pijkeren, J. van Eck, A. Niehaus

Journal:

Chemical Physics

Year:

1985

Language:

english

File:

PDF, 953 KB

english, 1985

48

Genetic Determinants of Hydroxycinnamic Acid Metabolism in Heterofermentative Lactobacilli

Gaur, Gautam, Oh, Jee-Hwan, Filannino, Pasquale, Gobbetti, Marco, van Pijkeren, Jan-Peter, GÃ¤nzle, Michael G., Schaffner, Donald W.

Journal:

Applied and Environmental Microbiology

Year:

2019

File:

PDF, 1.46 MB

2019

49

Glycerol Supplementation Enhances L. reuteri’s Protective Effect against S. Typhimurium Colonization in a 3-D Model of Colonic Epithelium

De Weirdt, Rosemarie, Crabbé, Aurélie, Roos, Stefan, Vollenweider, Sabine, Lacroix, Christophe, van Pijkeren, Jan Peter, Britton, Robert A., Sarker, Shameema, Van de Wiele, Tom, Nickerson, Cheryl A.,

Journal:

Year:

2012

Language:

english

File:

PDF, 2.97 MB

english, 2012

50

The use of Listeria monocytogenes as a DNA delivery vector for cancer gene therapy

Tangney, Mark, van Pijkeren, Jan Peter, Gahan, Cormac G.M.

Journal:

Bioengineered Bugs

Year:

2010

Language:

english

File:

PDF, 983 KB

english, 2010

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